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Treffer: Multi-Omics Analysis of Morbid Obesity Using a Patented Unsupervised Machine Learning Platform: Genomic, Biochemical, and Glycan Insights.

Title:
Multi-Omics Analysis of Morbid Obesity Using a Patented Unsupervised Machine Learning Platform: Genomic, Biochemical, and Glycan Insights.
Authors:
Šnajdar I; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia.; Department of Surgery, University Hospital Center Zagreb, 10000 Zagreb, Croatia., Bulić L; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia.; School of Medicine, Josip Juraj Strossmayer University of Osijek, 31000 Osijek, Croatia., Skelin A; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia.; Genos Glycoscience Research Laboratory, 10000 Zagreb, Croatia., Mršić L; Algebra Bernays University, 10000 Zagreb, Croatia., Sokač M; Algebra Bernays University, 10000 Zagreb, Croatia., Brkljačić M; Algebra Bernays University, 10000 Zagreb, Croatia., Matovinović M; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia., Linarić M; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia., Kovačić J; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia., Brlek P; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia.; School of Medicine, Josip Juraj Strossmayer University of Osijek, 31000 Osijek, Croatia.; Department of Molecular Biology, Faculty of Science, University of Zagreb, 10000 Zagreb, Croatia., Lauc G; Genos Glycoscience Research Laboratory, 10000 Zagreb, Croatia.; Faculty of Pharmacy and Biochemistry, University of Zagreb, 10000 Zagreb, Croatia., Smolić M; Faculty of Dental Medicine and Health, Josip Juraj Strossmayer University of Osijek, 31000 Osijek, Croatia., Primorac D; St. Catherine Specialty Hospital, 10000 Zagreb, Croatia.; School of Medicine, Josip Juraj Strossmayer University of Osijek, 31000 Osijek, Croatia.; Faculty of Dental Medicine and Health, Josip Juraj Strossmayer University of Osijek, 31000 Osijek, Croatia.; Forensic Science Program, Department of Biochemistry & Molecular Biology, The Pennsylvania State University, State College, PA 16802, USA.; Henry C. Lee College of Criminal Justice and Forensic Sciences, University of New Haven, West Haven, CT 06516, USA.; Sana Kliniken Oberfranken, 96450 Coburg, Germany.; School of Medicine, University of Split, 21000 Split, Croatia.; Medical School, University of Rijeka, 51000 Rijeka, Croatia.; Medical School, University of Mostar, 88000 Mostar, Bosnia and Herzegovina.; National Forensic Sciences University, Gandhinagar 382007, India.; School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Source:
International journal of molecular sciences [Int J Mol Sci] 2026 Feb 04; Vol. 27 (3). Date of Electronic Publication: 2026 Feb 04.
Publication Type:
Journal Article
Language:
English
Journal Info:
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
Imprint Name(s):
Original Publication: Basel, Switzerland : MDPI, [2000-
References:
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Contributed Indexing:
Keywords: glycosylation; machine learning; morbid obesity; personalized medicine; whole-genome sequencing
Substance Nomenclature:
0 (Polysaccharides)
Entry Date(s):
Date Created: 20260213 Date Completed: 20260213 Latest Revision: 20260216
Update Code:
20260216
PubMed Central ID:
PMC12898758
DOI:
10.3390/ijms27031551
PMID:
41683970
Database:
MEDLINE

Weitere Informationen

Morbid obesity is a complex, multifactorial disorder characterized by metabolic and inflammatory dysregulation. The aim of this study was to observe changes in obese patients adhering to a personalized nutrition plan based on multi-omic data. This study included 14 adult patients with a body mass index (BMI) > 40 kg/m<sup>2</sup> who were consecutively recruited from those presenting to our outpatient clinic and who met the inclusion criteria. Clinical, biochemical, hormonal, and glycomic parameters were assessed, along with whole-genome sequencing (WGS) that included a focused analysis of obesity-associated genes and an extended analysis encompassing genes related to cardiometabolic disorders, hereditary cancer risk, and nutrigenetic profiles. Patients were stratified into nutrigenetic clusters using a patented unsupervised machine learning platform (German Patent Office, No. DE 20 2025 101 197 U1), which was employed to generate personalized nutrigenetic dietary recommendations for patients with morbid obesity to follow over a six-month period. At baseline, participants exhibited elevated glucose, insulin, homeostatic model assessment for insulin resistance (HOMA-IR), triglycerides, and C-reactive protein (CRP) levels, consistent with insulin resistance and chronic low-grade inflammation. The majority of participants harbored risk alleles within the fat mass and obesity-associated gene (FTO) and the interleukin-6 gene (IL-6), together with multiple additional significant variants identified across more than 40 genes implicated in metabolic regulation and nutritional status. Using an AI-driven clustering model, these genetic polymorphisms delineated a uniform cluster of patients with morbid obesity. The mean GlycanAge index (56 ± 12.45 years) substantially exceeded chronological age (32 ± 9.62 years), indicating accelerated biological aging. Following a six-month personalized nutrigenetic dietary intervention, significant reductions were observed in both BMI (from 52.09 ± 7.41 to 34.6 ± 9.06 kg/m<sup>2</sup>, p < 0.01) and GlycanAge index (from 56 ± 12.45 to 48 ± 14.83 years, p < 0.01). Morbid obesity is characterized by a pro-inflammatory and metabolically adverse molecular signature reflected in accelerated glycomic aging. Personalized nutrigenetic dietary interventions, derived from AI-driven analysis of whole-genome sequencing (WGS) data, effectively reduced both BMI and biological age markers, supporting integrative multi-omics and machine learning approaches as promising tools in precision-based obesity management.