*Result*: Predicting upwelling dynamics in the South Sea of Java, Indonesia: A deep learning approach with ConvLSTM and 3D-CNN.

Title:
Predicting upwelling dynamics in the South Sea of Java, Indonesia: A deep learning approach with ConvLSTM and 3D-CNN.
Authors:
Rantini D; Data Science Technology Study Program, Department of Engineering, Faculty of Advanced Technology and Multidiscipline, Universitas Airlangga, Surabaya, 60115, Indonesia.; Research Group of Data-Driven Decision Support System, Faculty of Advanced Technology and Multidiscipline, Universitas Airlangga, Surabaya, 60115, Indonesia., Kruba R; Department of Statistics, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, 23111, Indonesia., Haditiar Y; Department of Marine Sciences, Faculty of Marine and Fisheries, Universitas Syiah Kuala, Banda Aceh, 23111, Indonesia., Ikhwan M; Department of Mathematics, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, 23111, Indonesia., Jati Wijaya Y; Department of Oceanography, Faculty of Fisheries and Marine Science, Diponegoro University, Semarang, 50275, Indonesia., Ismanto A; Department of Oceanography, Faculty of Fisheries and Marine Science, Diponegoro University, Semarang, 50275, Indonesia., Yandra MM; Data Science Technology Study Program, Department of Engineering, Faculty of Advanced Technology and Multidiscipline, Universitas Airlangga, Surabaya, 60115, Indonesia., Rahman H; Data Science Technology Study Program, Department of Engineering, Faculty of Advanced Technology and Multidiscipline, Universitas Airlangga, Surabaya, 60115, Indonesia., Ramadan A; Information System Study Program, School of Industrial and System Engineering, Telkom University, Surabaya Campus, Jl. Ketintang No.156, Surabaya, 60231, East Java, Indonesia., Othman F; Department of Computer System and Technology, Faculty of Computer Science and Information Technology, University of Malaya, Malaysia.
Source:
MethodsX [MethodsX] 2026 Jan 15; Vol. 16, pp. 103802. Date of Electronic Publication: 2026 Jan 15 (Print Publication: 2026).
Publication Type:
Journal Article
Language:
English
Journal Info:
Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101639829 Publication Model: eCollection Cited Medium: Print ISSN: 2215-0161 (Print) Linking ISSN: 22150161 NLM ISO Abbreviation: MethodsX Subsets: PubMed not MEDLINE
Imprint Name(s):
Original Publication: Amsterdam : Elsevier B.V., [2014]-
References:
Science. 2014 Jul 4;345(6192):77-80. (PMID: 24994651)
PLoS One. 2022 Oct 21;17(10):e0276260. (PMID: 36269773)
Sci Adv. 2023 Mar 10;9(10):eadf2827. (PMID: 36888711)
Nat Commun. 2024 Jul 24;15(1):6238. (PMID: 39043692)
Contributed Indexing:
Keywords: 3D-CNN; Chlorophyll-a; ConvLSTM; Marine; Upwelling
Entry Date(s):
Date Created: 20260202 Date Completed: 20260202 Latest Revision: 20260204
Update Code:
20260204
PubMed Central ID:
PMC12857263
DOI:
10.1016/j.mex.2026.103802
PMID:
41624226
Database:
MEDLINE

*Further Information*

*Oceans exhibit complex dynamics influenced by climate change, anthropogenic activities, and natural phenomena. Understanding these dynamics is critical for ensuring the sustainability of marine environments and their optimal utilization. This research aims to study and monitor upwelling phenomena in the South Sea of Java. Upwelling, the exchange of nutrient-rich, cold water from deeper layers to the surface, enhances marine biological productivity; Sea Surface Temperature (SST) serves as a key indicator for its detection. To achieve these objectives, this study employs both ConvLSTM and 3D-CNN. ConvLSTM, a deep learning architecture that integrates convolutional structures within LSTM units, effectively captures spatiotemporal dependencies in sequential data. 3D-CNN, a deep learning model extending traditional 2D convolutional neural networks, processes volumetric data, enabling the extraction of spatial features across three dimensions. Analysis reveals that ConvLSTM outperforms 3D-CNN in modeling upwelling data in the South Sea of Java. This is evidenced by lower Root Mean Square Error (RMSE) and Mean Absolute Error (MAE). The ConvLSTM method was then used for forecasting, and the results were validated with data obtained from local fishermen regarding their fishing expeditions. Visual analysis confirms that the ConvLSTM method accurately models upwelling data in the South Sea of Java with fishermen's schedules. ConvLSTM and 3D-CNN methods were comparatively evaluated for modeling Sea Surface Temperature (SST) data, considering wind speed, sea surface salinity, and the El Niño-Southern Oscillation (ENSO) phase as influential factors. Based on Root Mean Square Error (RMSE) and Mean Absolute Error (MAE) values, the ConvLSTM method exhibited lower values, indicating superior performance compared to the 3D-CNN approach. Specifically, RMSE and MAE values for ConvLSTM were 0.4161 and 0.3017, respectively, while for 3D-CNN, the corresponding values were 0.6095 and 0.4259. Upwelling data forecasting results were validated against local fishermen's schedules, with data collected in July 2022. Visual inspection confirmed alignment between the forecasted upwelling patterns and the fishermen's activity.
(© 2026 The Authors. Published by Elsevier B.V.)*

*The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.*