*Result*: Genome-wide consensus transcriptional signatures identify synaptic pruning linking Alzheimer's disease and epilepsy.
Original Publication: Houndmills, Hampshire, UK ; New York, NY : Stockton Press, c1996-
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0 (Receptors, Immunologic)
0 (TYROBP protein, human)
0 (tau Proteins)
0 (TREM2 protein, human)
0 (Membrane Proteins)
0 (Adaptor Proteins, Signal Transducing)
*Further Information*
*Alzheimer's disease (AD) and epilepsy (EP) share a complex bidirectional relationship, yet the molecular mechanisms underlying their comorbidity remain insufficiently explored. To identify potential transcriptional programs across animal models and human patients with AD and EP, we conducted a comprehensive genome-wide transcriptomic analysis. Our investigation included mouse models of temporal lobe epilepsy (pilocarpine- and kainic acid-induced; n = 280), AD transgenic models (7 transgenic models expressing human tau or amyloid pathology; n = 257), and performed cross-species validation in human cohorts (EP: n = 182; AD: n = 301). We identified a highly conserved immune-related module across all models and patient cohorts. The hub consensus signatures of this module were centered around a microglial synaptic pruning pathway involving TYROBP, TREM2, and C1Q complement components. Gene regulatory network analysis identified TYROBP as the key regulatory signature. These signatures showed consistent up-regulation in both conditions and diagnostic potential. Differential expression analyses revealed their predominant expression in specific microglial subpopulations associated with complement-mediated synaptic pruning and immune activation. Neural circuit modeling further demonstrates the asymmetric sensitivity of synaptic pruning to network dynamics. Loss of inhibitory synapses has a disproportionately significant impact on neural network excitation/inhibition balance and synchronization. Our findings support microglial complement-mediated synaptic pruning as a conserved central pathway linking neurodegeneration to epileptogenesis, suggesting a promising therapeutic target for AD and EP comorbidity.
(© 2025. The Author(s), under exclusive licence to Springer Nature Limited.)*
*Competing interests: The author declares no competing interests. Ethics approval and consent to participate: This study analyzed publicly available datasets derived from multiple prior studies in which informed consent was obtained from all participants under the original institutional review board approvals. As our research involved secondary analysis of existing de-identified data without direct human subject interaction, additional ethical approval was not required.*