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Treffer: Realfreq: real-time base modification analysis for nanopore sequencing.

Title:
Realfreq: real-time base modification analysis for nanopore sequencing.
Authors:
Samarasinghe, Suneth1,2,3 (AUTHOR), Deveson, Ira2,3,4 (AUTHOR), Gamaarachchi, Hasindu1,2,3 (AUTHOR)
Source:
Bioinformatics. Apr2025, Vol. 41 Issue 4, p1-4. 4p.
Database:
Academic Search Index

Weitere Informationen

The article in the journal Bioinformatics introduces realfreq, a framework for real-time base modification analysis during nanopore sequencing. Realfreq allows for live analysis of base modification frequencies while the sequencer is running, reducing the time to results. The framework is open-source, implemented in C programming language, and shell scripts, and can be accessed at https://github.com/imsuneth/realfreq. Realfreq has the potential to enhance nanopore sequencing applications in fields such as clinical diagnostics and forensics by providing real-time modification frequency data. [Extracted from the article]