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  • Suche: "Transcriptome - genetics"

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1

The landscape of N6-methyladenosine in localized primary prostate cancer
Xin Xu ; Helen Zhu ; Rupert Hugh-White ; et al.
Nat Genet
Xu, X, Zhu, H, Hugh-White, R, Livingstone, J, Eng, S, Zeltser, N, Wang, Y, Pajdzik, K, Chen, S, Houlahan, K E, Luo, W, Liu, S, Xu, X, Sheng, M, Guo, W Y, Arbet, J, Song, Y, Wang, M, Zeng, Y, Wang, S, Zhu, G, Gao, T, Chen, W, Ci, X, Xu, W, Xu, K, Orain, M, Picard, V, Hovington, H, Bergeron, A, Lacombe, L, Têtu, B, Fradet, Y, Lupien, M, Wei, G-H, Koritzinsky, M, Bristow, R G, Fleshner, N E, Wu, X, Shao, Y, He, C, Berlin, A, van der Kwast, T, Leong, H, Boutros, P C & He, H H 2025, 'The landscape of N 6-methyladenosine in localized primary prostate cancer.', Nature Genetics, vol. 57, no. 4, pp. 934-948. https://doi.org/10.1038/s41588-025-02128-y

Male Adenosine Prostatic Neoplasms/gene... Prostatic Neoplasms Transcriptome/genetics Prognosis …
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2

Characterization of human melanoma skin cancer models: A step towards model-based melanoma research: A step towards model-based melanoma research
Nicoline Dorothea Daugaard ; Rikke Tholstrup ; Jakob Rask Tornby ; et al.
Acta Biomaterialia. 191:308-324

Neoplastic Tumor Skin Neoplasms Transcriptome/genetics RNAseq Biological …
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3

The Quick Guide to RNA-Seq: From Data Acquisition to Functional Analysis
Solaiman, Morjina
Journal of Scientific Reports. 10:37-51

RNA seq RNA-Seq Transcriptome/genetics Sequence Analysis, RNA/m...
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4

Single-cell transcriptome combined with genetic tracing reveals a roadmap of fibrosis formation during proliferative vitreoretinopathy
Mengyu Liao ; Zhisheng Ye ; Yumeng Zhao ; et al.
Proc Natl Acad Sci U S A
Liao, M, Ye, Z, Zhao, Y, Nan, J, Liu, Y, Yao, X, Yang, T, Guo, J, Jin, X, Zhang, H, You, C, Xu, H, Yu, J, Chen, Y, Wang, X & Yan, H 2025, 'Single-cell transcriptome combined with genetic tracing reveals a roadmap of fibrosis formation during proliferative vitreoretinopathy', Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 37, e2424487122. https://doi.org/10.1073/pnas.2424487122

Fibroblasts/metabolism Mice Retinal Pigment Epitheli... Thrombospondin 1/genetic... Epithelial-Mesenchymal T... Fibrosis/genetics …
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5

Synovial tissue atlas in juvenile idiopathic arthritis reveals pathogenic niches associated with disease severity
Chrissy Bolton ; Christopher B. Mahony ; Elizabeth Clay ; et al.
Sci Transl Med
MAPJAG Study Group 2025, 'Synovial tissue atlas in juvenile idiopathic arthritis reveals pathogenic niches associated with disease severity', Science Translational Medicine, vol. 17, no. 805, pp. eadt6050. https://doi.org/10.1126/scitranslmed.adt6050
the MAPJAG Study Group 2025, 'Synovial tissue atlas in juvenile idiopathic arthritis reveals pathogenic niches associated with disease severity', Science translational medicine, vol. 17, no. 805, eadt6050. https://doi.org/10.1126/scitranslmed.adt6050

Male Juvenile/pathology Adolescent Arthritis Synovial Membrane/pathol... Myeloid Cells/metabolism …
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6

Transcriptomic Analysis of APOE4's Impact on the Peripheral Immune System in Alzheimer's Disease
Hubaib, Muhammad

Transcriptome/drug effec... Transcriptome/radiation... Alzheimer Disease Transcriptome/immunology Transcriptome/genetics Alzheimer's …
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7

Integrative metabolomics-genomics analysis identifies key networks in a stem cell-based model of schizophrenia
Angeliki Spathopoulou ; Gabriella A. Sauerwein ; Valentin Marteau ; et al.
Mol Psychiatry
Molecular Psychiatry

631/532 gamma-Aminobutyric Acid/... Cell Differentiation/phy... Glutamate Decarboxylase/... Transcriptome/genetics [... Humans [MeSH] …
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8

Transcriptomic dysregulation and autistic-like behaviors in Kmt2c haploinsufficient mice rescued by an LSD1 inhibitor
Takumi Nakamura ; Toru Yoshihara ; Chiharu Tanegashima ; et al.
Mol Psychiatry

Histone Demethylases Male Heart Defects, Congenita... 0301 basic medicine 0303 health sciences Behavior, Animal …
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9

A Single-Cell Transcriptomic Analysis of the Mouse Hippocampus After Voluntary Exercise
Aditi Methi ; Md Rezaul Islam ; Lalit Kaurani ; et al.
Mol Neurobiol
Molecular neurobiology 61(8), 5628-5645 (2024). doi:10.1007/s12035-023-03869-9

Male Volition Neurogenesis genetics [Transcriptome] Cognitive decline metabolism [Hippocampus] …
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10

Transcriptional heterogeneity shapes stress-adaptive responses in yeast
Nadal-Ribelles, Mariona ; Solé Serra, Carme ; de Nadal, Eulalia ; et al.
Nat Commun
Articles publicats en revistes (Institut de Recerca Biomèdica (IRB Barcelona))
Dipòsit Digital de la UB
instname
Nature Communications, Vol 16, Iss 1, Pp 1-17 (2025)
Nature communications, vol. 16, no. 1, pp. 2631

Saccharomyces cerevisiae... Saccharomyces cerevisiae... Saccharomyces cerevisiae... Saccharomyces cerevisiae... Gene Expression Regulati... Transcriptome/genetics …
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11

Multiomics unravels the complexity of male obesity: a prospective observational study
Papadakis, G.E. ; Vionnet, N. ; Niederländer, N.J. ; et al.
Journal of translational medicine, vol. 23, no. 1, pp. 138

Humans Male Prospective Studies Obesity/complications Adult Testosterone/blood …
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12

Disrupted extracellular matrix and cell cycle genes in autism-associated Shank3 deficiency are targeted by lithium
Valentin Ioannidis ; Rakshita Pandey ; Helen Friedericke Bauer ; et al.
Mol Psychiatry
Molecular psychiatry 29(3), 704-717 (2024). doi:10.1038/s41380-023-02362-y
Molecular Psychiatry

Male genetics [Chromosome Dis... drug effects [Cell Cycle... Autism Spectrum Disorder Chromosomes, Human, Pair... genetics [Transcriptome] …
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13

Characterization of transcriptional profiles associated with stress-induced neuronal activation in Arc-GFP mice
Tamer Butto ; Monika Chanu Chongtham ; Kanak Mungikar ; et al.
Mol Psychiatry

Neurons Male 0301 basic medicine 0303 health sciences Green Fluorescent Protei... 610 Medizin …
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14

Single-cell transcriptomics link gene expression signatures to clinicopathological features of gonadotroph and lactotroph PitNET
T. Elise Potthoff ; Carolin Walter ; Daniela Jeising ; et al.
J Transl Med
Journal of Translational Medicine, Vol 22, Iss 1, Pp 1-18 (2024)

Male Adult 0301 basic medicine Lactotrophs Pituitary neuroendocrine... Lactotroph …
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15

Transcriptomic and de novo proteomic analyses of organotypic entorhino-hippocampal tissue cultures reveal changes in metabolic and signaling regulators in TTX-induced synaptic plasticity
Lenz, Maximilian ; Turko, Paul ; Kruse, Pia ; et al.
Mol Brain
Molecular Brain, Vol 17, Iss 1, Pp 1-9 (2024)

Proteomics 0301 basic medicine 0303 health sciences Neuronal Plasticity Short Report Excitatory Postsynaptic... …
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16

Most Upf1-associated mRNAs have short poly(A) tails, lack a premature termination codon and are targeted by NMD
Badis-Bréard, Gwenael ; Gouhier, Toni

Nanopore Sequencing Nonsense Mediated mRNA D... Transcriptome/genetics Poly A Nonsense Mediated mRNA D...
Report
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17

Robust detection of clinically relevant features in single-cell RNA profiles of patient-matched fresh and formalin-fixed paraffin-embedded (FFPE) lung cancer tissue
Alexandra Trinks ; Miha Milek ; Dieter Beule ; et al.
Cell Oncol (Dordr)

Cryopreservation 0301 basic medicine 0303 health sciences Paraffin Embedding Lung Neoplasms Tissue Fixation …
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18

Transcriptomic changes in oligodendrocytes and precursor cells associate with clinical outcomes of Parkinson’s disease
Mohammad Dehestani ; Velina Kozareva ; Cornelis Blauwendraat ; et al.
Mol Brain
Molecular Brain, Vol 17, Iss 1, Pp 1-10 (2024)
Molecular brain 17(1), 56 (2024). doi:10.1186/s13041-024-01128-z

Male metabolism [Oligodendroc... snRNA-seq Short Report genetics [Transcriptome] metabolism [Oligodendrog... …
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19

Interactive molecular causal networks of hypertension using a fast machine learning algorithm MRdualPC
Kelly, Jack ; Xu, Xiaoguang ; Eales, James M ; et al.
BMC Med Res Methodol
BMC Medical Research Methodology, Vol 24, Iss 1, Pp 1-7 (2024)
Kelly, J, Xu, X, Eales, J M, Keavney, B, Berzuini, C, Tomaszewski, M & Guo, H 2024, 'Interactive molecular causal networks of hypertension using a fast machine learning algorithm MRdualPC', BMC Medical Research Methodology, vol. 24, no. 1, 168. https://doi.org/10.1186/s12874-024-02229-y

0301 basic medicine Medicine (General) 0206 medical engineering Multi-omics integration 02 engineering and techn... Machine Learning …
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20

pyTWMR: transcriptome-wide Mendelian randomization in python
Sergey Oreshkov ; Kaido Lepik ; Federico Santoni
Bioinformatics
Bioinformatics, vol. 40, no. 8

0301 basic medicine Mendelian Randomization... Transcriptome/genetics Polymorphism, Single Nuc... Software Algorithms …
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